Expression Module Reports
Expression module detection applies different criteria to define spot clusters of co-regulated metagenes:
overexpression and underexpression, mutual correlations between the metagenes,
k-means clustering and cluster detection in the distance map.
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General report sheets provide overview maps of the modules detected, module-related heatmaps characterizing the
expression profiles of the selected features in the series of samples, and individual module reports
providing detailed information such as ranked gene list selected with the module and functional analysis in terms of
gene set lists ranked for over-representation in the module.
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Profile sheets provide the module expression profiles on single sample and group resolution.
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Module relation reports contain the wTO correlation network and association of the groups to the modules.
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Chromosome plots visualize enrichment of chromosomal postitions (chromosome/band) in the modules as overview heatmaps and individual chromosome plots.
Overexpression Spots
Group Overexpression Spots
Underexpression Spots
Correlation Cluster
K-Means Cluster
D-Cluster